Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system atpase | HMPREF9695_01380 | Not Available | Negative | 1488477 - 1490705 | 79529.7 |
| tolc family type i secretion outer membrane protein | HMPREF9695_01381 | Not Available | Negative | 1490858 - 1492429 | 57202.6 |
| hypothetical protein | HMPREF9695_01382 | Not Available | Negative | 1492887 - 1493816 | 33603.4 |
| hypothetical protein | HMPREF9695_01383 | Not Available | Negative | 1493806 - 1497210 | 124923.0 |
| urea abc transporter, urea binding protein | HMPREF9695_01384 | Not Available | Positive | 1497352 - 1498614 | 45815.0 |
| urea abc transporter, permease urtb | HMPREF9695_01385 | Not Available | Positive | 1498725 - 1499651 | 33319.9 |
| urea abc transporter, permease urtc | HMPREF9695_01386 | Not Available | Positive | 1499665 - 1500861 | 43052.4 |
| urea abc transporter, atp-binding protein urtd | HMPREF9695_01387 | Not Available | Positive | 1500871 - 1501626 | 28132.2 |
| urea abc transporter, atp-binding protein urte | HMPREF9695_01388 | Not Available | Positive | 1501649 - 1502338 | 24767.4 |
| formamidase | HMPREF9695_01389 | Not Available | Positive | 1502369 - 1503598 | 44523.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
