Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01241 | Not Available | Positive | 1342125 - 1342268 | 4997.06 |
| hypothetical protein | HMPREF9695_01242 | Not Available | Positive | 1342534 - 1342647 | 4072.92 |
| hypothetical protein | HMPREF9695_01243 | Not Available | Positive | 1342659 - 1342904 | 8327.89 |
| hypothetical protein | HMPREF9695_01244 | Not Available | Positive | 1343289 - 1344527 | 46628.0 |
| hypothetical protein | HMPREF9695_01245 | Not Available | Negative | 1345413 - 1346792 | 50037.6 |
| hypothetical protein | HMPREF9695_01246 | Not Available | Negative | 1346792 - 1347511 | 26609.9 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_01247 | Not Available | Positive | 1347601 - 1348656 | 36822.9 |
| czca family heavy metal efflux pump | HMPREF9695_01248 | Not Available | Positive | 1348660 - 1351812 | 112226.0 |
| hypothetical protein | HMPREF9695_01249 | Not Available | Positive | 1351755 - 1352159 | 14553.4 |
| hypothetical protein | HMPREF9695_01250 | Not Available | Positive | 1352228 - 1353115 | 32538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
