Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1a family penicillin-binding protein | HMPREF9695_01111 | Not Available | Negative | 1205724 - 1207994 | 82362.0 |
| upf0260 protein | HMPREF9695_01112 | Not Available | Positive | 1208318 - 1208836 | 19550.0 |
| drug:h+ antiporter-2 (14 spanner) (dha2) family drug resistance mfs transporter | HMPREF9695_01113 | Not Available | Positive | 1209029 - 1210612 | 55535.3 |
| hypothetical protein | HMPREF9695_01114 | Not Available | Positive | 1211185 - 1211583 | 14523.4 |
| hypothetical protein | HMPREF9695_01115 | Not Available | Positive | 1211580 - 1212290 | 26935.5 |
| hypothetical protein | HMPREF9695_01116 | Not Available | Negative | 1212391 - 1212633 | 8689.29 |
| hypothetical protein | HMPREF9695_01117 | Not Available | Negative | 1212769 - 1212954 | 7210.79 |
| hypothetical protein | HMPREF9695_01118 | Not Available | Positive | 1213081 - 1213458 | 14124.0 |
| hypothetical protein | HMPREF9695_01119 | Not Available | Negative | 1213584 - 1214114 | 20121.2 |
| hypothetical protein | HMPREF9695_01120 | Not Available | Positive | 1214583 - 1214747 | 5978.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
