Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | HMPREF9695_01101 | Not Available | Positive | 1198243 - 1200003 | 63479.1 |
| hypothetical protein | HMPREF9695_01102 | Not Available | Positive | 1199996 - 1200625 | 22254.0 |
| hypothetical protein | HMPREF9695_01103 | Not Available | Positive | 1200775 - 1201059 | 10444.5 |
| hypothetical protein | HMPREF9695_01104 | Not Available | Negative | 1201062 - 1202057 | 36315.5 |
| hypothetical protein | HMPREF9695_01105 | Not Available | Positive | 1202184 - 1202390 | 7319.83 |
| hypothetical protein | HMPREF9695_01106 | Not Available | Positive | 1202448 - 1203176 | 27561.9 |
| hypothetical protein | HMPREF9695_01107 | Not Available | Positive | 1203307 - 1203648 | 12105.9 |
| yjbe family integral membrane protein | HMPREF9695_01108 | Not Available | Positive | 1203870 - 1204487 | 21951.7 |
| hypothetical protein | HMPREF9695_01109 | Not Available | Negative | 1204558 - 1205124 | 19863.2 |
| hypothetical protein | HMPREF9695_01110 | Not Available | Negative | 1205121 - 1205699 | 20541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
