Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01071 | Not Available | Negative | 1166637 - 1167752 | 40506.1 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_01072 | Not Available | Negative | 1167820 - 1169100 | 46636.8 |
| sigma-70 family rna polymerase sigma factor | HMPREF9695_01073 | Not Available | Positive | 1169361 - 1169861 | 18882.6 |
| hypothetical protein | HMPREF9695_01074 | Not Available | Positive | 1169858 - 1170532 | 23721.4 |
| hypothetical protein | HMPREF9695_01075 | Not Available | Positive | 1170653 - 1172137 | 51681.6 |
| tigr03809 family protein | HMPREF9695_01076 | Not Available | Positive | 1172471 - 1172800 | 12289.6 |
| hypothetical protein | HMPREF9695_01077 | Not Available | Negative | 1172756 - 1174126 | 46441.0 |
| drug resistance transporter, bcr/cfla subfamily | HMPREF9695_01078 | Not Available | Negative | 1174270 - 1175517 | 43860.9 |
| hypothetical protein | HMPREF9695_01079 | Not Available | Negative | 1175576 - 1176265 | 25616.9 |
| lao/ao transport system atpase | HMPREF9695_01080 | Not Available | Negative | 1176265 - 1177260 | 35067.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
