Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| error-prone dna polymerase | HMPREF9695_01061 | Not Available | Positive | 1150560 - 1153937 | 127897.0 |
| hypothetical protein | HMPREF9695_01062 | Not Available | Positive | 1154005 - 1155402 | 50060.9 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_01063 | Not Available | Positive | 1155513 - 1156775 | 45483.4 |
| czca family heavy metal efflux pump | HMPREF9695_01064 | Not Available | Positive | 1156830 - 1159949 | 112993.0 |
| tolc family type i secretion outer membrane protein | HMPREF9695_01065 | Not Available | Negative | 1159953 - 1161368 | 50043.2 |
| hypothetical protein | HMPREF9695_01066 | Not Available | Positive | 1161550 - 1163502 | 71042.3 |
| hypothetical protein | HMPREF9695_01067 | Not Available | Negative | 1163499 - 1164278 | 27638.8 |
| hypothetical protein | HMPREF9695_01068 | Not Available | Negative | 1164460 - 1165173 | 24734.5 |
| sigma-70 family rna polymerase sigma factor | HMPREF9695_01069 | Not Available | Positive | 1165407 - 1165952 | 19920.9 |
| hypothetical protein | HMPREF9695_01070 | Not Available | Positive | 1165955 - 1166596 | 22110.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
