Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase | HMPREF9695_01031 | Not Available | Positive | 1111611 - 1112270 | 22705.6 |
| gamma-glutamyltransferase | HMPREF9695_01032 | Not Available | Negative | 1112481 - 1114070 | 56166.5 |
| hypothetical protein | HMPREF9695_01033 | Not Available | Negative | 1114205 - 1115491 | 45829.0 |
| hypothetical protein | HMPREF9695_01034 | Not Available | Negative | 1115619 - 1116617 | 35197.7 |
| hypothetical protein | HMPREF9695_01035 | Not Available | Positive | 1116974 - 1118443 | 55699.9 |
| hi0933 family flavoprotein | HMPREF9695_01036 | Not Available | Positive | 1118489 - 1119676 | 42254.8 |
| hopene-associated glycosyltransferase hpnb | HMPREF9695_01037 | Not Available | Positive | 1119852 - 1121024 | 41721.0 |
| squalene synthase hpnc | HMPREF9695_01038 | Not Available | Positive | 1121021 - 1121902 | 32307.9 |
| squalene synthase hpnd | HMPREF9695_01039 | Not Available | Positive | 1121904 - 1122758 | 31834.5 |
| squalene-associated fad-dependent desaturase | HMPREF9695_01040 | Not Available | Positive | 1122758 - 1124017 | 45122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
