Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03761 | Not Available | + | 3940179 - 3941285 | 40604.5 |
| beta-ketoadipyl-coa thiolase | HMPREF9695_03762 | Not Available | - | 3941437 - 3942645 | 41974.7 |
| dna mismatch repair protein muts | HMPREF9695_03763 | Not Available | + | 3942766 - 3945576 | 100526.0 |
| hypothetical protein | HMPREF9695_03764 | Not Available | - | 3945583 - 3946095 | 17869.6 |
| hypothetical protein | HMPREF9695_03765 | Not Available | - | 3946152 - 3946931 | 28063.9 |
| hypothetical protein | HMPREF9695_03766 | Not Available | - | 3946931 - 3947782 | 30233.8 |
| aliphatic sulfonates family abc transporter, substrate-binding protein | HMPREF9695_03767 | Not Available | - | 3947882 - 3948856 | 35144.6 |
| [protein-pii] uridylyltransferase | HMPREF9695_03768 | Not Available | + | 3949052 - 3951895 | 106559.0 |
| methylated-dna-[protein]-cysteine s-methyltransferase | HMPREF9695_03769 | Not Available | - | 3951892 - 3952431 | 19654.7 |
| hypothetical protein | HMPREF9695_03770 | Not Available | + | 3952568 - 3952942 | 13292.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
