Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-(glutamine-n5) methyltransferase, release factor-specific | HMPREF9695_03741 | Not Available | Positive | 3921450 - 3922340 | 30930.1 |
| hypothetical protein | HMPREF9695_03742 | Not Available | Positive | 3922790 - 3923512 | 27003.4 |
| hypothetical protein | HMPREF9695_03743 | Not Available | Negative | 3923577 - 3924332 | 28145.2 |
| hydroxyacylglutathione hydrolase | HMPREF9695_03744 | Not Available | Positive | 3924460 - 3925227 | 27958.6 |
| hypothetical protein | HMPREF9695_03745 | Not Available | Positive | 3925227 - 3925664 | 15830.5 |
| hypothetical protein | HMPREF9695_03746 | Not Available | Negative | 3925661 - 3926536 | 30322.1 |
| acetoacetyl-coa reductase | HMPREF9695_03747 | Not Available | Negative | 3926610 - 3927335 | 25474.7 |
| acetyl-coa acetyltransferase | HMPREF9695_03748 | Not Available | Negative | 3927474 - 3928649 | 40532.8 |
| polyhydroxyalkanoate synthesis repressor phar | HMPREF9695_03749 | Not Available | Positive | 3928947 - 3929546 | 23026.4 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03750 | Not Available | Negative | 3929605 - 3931374 | 64578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
