Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03711 | Not Available | Positive | 3890711 - 3891361 | 22997.5 |
| hypothetical protein | HMPREF9695_03712 | Not Available | Positive | 3891369 - 3891938 | 21139.4 |
| hypothetical protein | HMPREF9695_03713 | Not Available | Negative | 3891913 - 3892563 | 24210.7 |
| hypothetical protein | HMPREF9695_03714 | Not Available | Positive | 3892689 - 3892997 | 11185.3 |
| hypothetical protein | HMPREF9695_03715 | Not Available | Positive | 3893300 - 3893599 | 10912.6 |
| hypothetical protein | HMPREF9695_03716 | Not Available | Negative | 3893461 - 3894810 | 49462.2 |
| 3-dehydroquinate synthase | HMPREF9695_03717 | Not Available | Negative | 3894889 - 3896031 | 39851.9 |
| shikimate kinase | HMPREF9695_03718 | Not Available | Negative | 3896028 - 3896651 | 22287.7 |
| hypothetical protein | HMPREF9695_03719 | Not Available | Positive | 3896845 - 3896991 | 5308.74 |
| tyrosine recombinase xerd | HMPREF9695_03720 | Not Available | Positive | 3897009 - 3897968 | 35248.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
