Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | HMPREF9695_03612 | Not Available | Positive | 3786421 - 3787590 | 41499.0 |
| hypothetical protein | HMPREF9695_03613 | Not Available | Positive | 3787587 - 3788162 | 20847.8 |
| trna pseudouridine synthase a | HMPREF9695_03614 | Not Available | Negative | 3788292 - 3789029 | 27206.2 |
| methionyl-trna formyltransferase | HMPREF9695_03615 | Not Available | Negative | 3789029 - 3789961 | 32978.3 |
| peptide deformylase | HMPREF9695_03616 | Not Available | Negative | 3789975 - 3790490 | 19486.8 |
| hypothetical protein | HMPREF9695_03617 | Not Available | Positive | 3790681 - 3791871 | 44225.3 |
| hypothetical protein | HMPREF9695_03618 | Not Available | Positive | 3792049 - 3793422 | 48815.9 |
| hypothetical protein | HMPREF9695_03619 | Not Available | Negative | 3793441 - 3794010 | 19568.6 |
| hypothetical protein | HMPREF9695_03620 | Not Available | Negative | 3794079 - 3794501 | 14728.1 |
| recombination protein recr | HMPREF9695_03621 | Not Available | Negative | 3794520 - 3795125 | 21577.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
