Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent metallopeptidase hflb | HMPREF9695_03543 | Not Available | Negative | 3715547 - 3717463 | 69742.4 |
| trna(ile)-lysidine synthetase | HMPREF9695_03544 | Not Available | Negative | 3717656 - 3718699 | 37205.4 |
| tol-pal system protein ybgf | HMPREF9695_03545 | Not Available | Negative | 3718848 - 3719978 | 40091.6 |
| peptidoglycan-associated lipoprotein | HMPREF9695_03546 | Not Available | Negative | 3720047 - 3720538 | 17726.1 |
| hypothetical protein | HMPREF9695_03547 | Not Available | Positive | 3720646 - 3720921 | 10236.4 |
| hypothetical protein | HMPREF9695_03548 | Not Available | Negative | 3720792 - 3721541 | 28651.3 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03549 | Not Available | Negative | 3721720 - 3724038 | 85062.3 |
| protein tolb | HMPREF9695_03550 | Not Available | Negative | 3724226 - 3725623 | 50964.6 |
| hypothetical protein | HMPREF9695_03551 | Not Available | Negative | 3725686 - 3726621 | 34203.9 |
| protein tolr | HMPREF9695_03552 | Not Available | Negative | 3726623 - 3727075 | 16036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
