Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase, atpase subunit | HMPREF9695_03444 | Not Available | Positive | 3617108 - 3618214 | 39592.2 |
| aquaporin z | HMPREF9695_03445 | Not Available | Negative | 3618265 - 3618978 | 24110.8 |
| 30s ribosomal protein s21 | HMPREF9695_03446 | Not Available | Positive | 3619258 - 3619563 | 11098.8 |
| hypothetical protein | HMPREF9695_03447 | Not Available | Negative | 3619765 - 3621252 | 52668.9 |
| mode molybdate transport repressor domain-containing protein | HMPREF9695_03448 | Not Available | Positive | 3621368 - 3622477 | 40911.4 |
| hypothetical protein | HMPREF9695_03449 | Not Available | Positive | 3622562 - 3623008 | 16221.9 |
| hypothetical protein | HMPREF9695_03450 | Not Available | Negative | 3623106 - 3624032 | 32053.8 |
| calcium/proton exchanger | HMPREF9695_03451 | Not Available | Negative | 3624190 - 3625287 | 38410.4 |
| hypothetical protein | HMPREF9695_03452 | Not Available | Positive | 3625401 - 3625784 | 13487.1 |
| nad(p) transhydrogenase subunit beta | HMPREF9695_03453 | Not Available | Negative | 3625848 - 3627248 | 48337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
