Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter, atp-binding protein | HMPREF9695_03434 | Not Available | Negative | 3607521 - 3608651 | 40038.3 |
| hypothetical protein | HMPREF9695_03435 | Not Available | Negative | 3608697 - 3609461 | 27336.4 |
| hypothetical protein | HMPREF9695_03436 | Not Available | Negative | 3609491 - 3610963 | 53476.1 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03437 | Not Available | Negative | 3611000 - 3612919 | 71366.5 |
| hypothetical protein | HMPREF9695_03438 | Not Available | Negative | 3612961 - 3613707 | 26785.1 |
| hypothetical protein | HMPREF9695_03439 | Not Available | Positive | 3613918 - 3615024 | 38500.1 |
| hypothetical protein | HMPREF9695_03440 | Not Available | Negative | 3615119 - 3615295 | 6872.44 |
| hypothetical protein | HMPREF9695_03441 | Not Available | Positive | 3615549 - 3615764 | 8293.96 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03442 | Not Available | Negative | 3615793 - 3616524 | 26058.7 |
| n5-carboxyaminoimidazole ribonucleotide mutase | HMPREF9695_03443 | Not Available | Positive | 3616620 - 3617111 | 16742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
