Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | HMPREF9695_03424 | Not Available | Positive | 3594824 - 3598291 | 123130.0 |
| hypothetical protein | HMPREF9695_03425 | Not Available | Positive | 3598434 - 3599459 | 36634.6 |
| hypothetical protein | HMPREF9695_03426 | Not Available | Negative | 3599360 - 3599554 | 6866.22 |
| hypothetical protein | HMPREF9695_03427 | Not Available | Positive | 3599617 - 3601257 | 57962.9 |
| hypothetical protein | HMPREF9695_03428 | Not Available | Positive | 3601310 - 3601882 | 19710.1 |
| succinyl-coa:3-ketoacid-coenzyme a transferase subunit b | HMPREF9695_03429 | Not Available | Negative | 3601938 - 3602588 | 23186.1 |
| 3-oxoacid coa-transferase, a subunit | HMPREF9695_03430 | Not Available | Negative | 3602612 - 3603313 | 25116.5 |
| hypothetical protein | HMPREF9695_03431 | Not Available | Positive | 3603608 - 3605701 | 73363.4 |
| hypothetical protein | HMPREF9695_03432 | Not Available | Negative | 3605798 - 3606613 | 28874.8 |
| hypothetical protein | HMPREF9695_03433 | Not Available | Negative | 3606613 - 3607524 | 33846.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
