Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03415 | Not Available | Negative | 3583919 - 3584677 | 26103.6 |
| hypothetical protein | HMPREF9695_03416 | Not Available | Negative | 3584803 - 3585291 | 18156.9 |
| thioredoxin-disulfide reductase | HMPREF9695_03417 | Not Available | Positive | 3585553 - 3586518 | 34293.1 |
| hypothetical protein | HMPREF9695_03418 | Not Available | Positive | 3586521 - 3587444 | 34643.4 |
| heavy metal translocating p-type atpase | HMPREF9695_03419 | Not Available | Negative | 3587748 - 3590192 | 85377.5 |
| hypothetical protein | HMPREF9695_03420 | Not Available | Positive | 3590245 - 3590520 | 10343.5 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03421 | Not Available | Positive | 3590787 - 3593198 | 85962.3 |
| Trna-his | Not Available | Not Available | Positive | 3593226 - 3593302 | Not Available |
| phasin | HMPREF9695_03422 | Not Available | Negative | 3593499 - 3593924 | 14892.8 |
| phasin | HMPREF9695_03423 | Not Available | Negative | 3594129 - 3594503 | 13227.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
