Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfpi family intracellular protease | HMPREF9695_03385 | Not Available | Negative | 3555205 - 3555768 | 20310.2 |
| hypothetical protein | HMPREF9695_03386 | Not Available | Positive | 3555819 - 3555986 | 6151.34 |
| hypothetical protein | HMPREF9695_03387 | Not Available | Negative | 3555993 - 3557042 | 39314.1 |
| rna polymerase sigma factor rpod | HMPREF9695_03388 | Not Available | Negative | 3557137 - 3559284 | 80219.6 |
| dna primase | HMPREF9695_03389 | Not Available | Negative | 3559527 - 3561560 | 74082.9 |
| hypothetical protein | HMPREF9695_03390 | Not Available | Positive | 3561700 - 3562320 | 21246.9 |
| hypothetical protein | HMPREF9695_03391 | Not Available | Positive | 3562405 - 3562497 | 3391.2 |
| hypothetical protein | HMPREF9695_03392 | Not Available | Positive | 3562460 - 3562762 | 11653.7 |
| hypothetical protein | HMPREF9695_03393 | Not Available | Positive | 3562704 - 3563021 | 12100.5 |
| hypothetical protein | HMPREF9695_03394 | Not Available | Negative | 3563059 - 3563457 | 15157.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
