Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03375 | Not Available | Negative | 3546576 - 3547790 | 44145.5 |
| hypothetical protein | HMPREF9695_03376 | Not Available | Positive | 3548693 - 3548962 | 9522.08 |
| hypothetical protein | HMPREF9695_03377 | Not Available | Positive | 3549104 - 3549448 | 13078.8 |
| hypothetical protein | HMPREF9695_03378 | Not Available | Positive | 3549445 - 3549918 | 17901.7 |
| hypothetical protein | HMPREF9695_03379 | Not Available | Positive | 3550106 - 3550561 | 16843.2 |
| lytic murein transglycosylase | HMPREF9695_03380 | Not Available | Negative | 3550572 - 3551378 | 29132.9 |
| hypothetical protein | HMPREF9695_03381 | Not Available | Negative | 3551494 - 3552405 | 32674.6 |
| hypothetical protein | HMPREF9695_03382 | Not Available | Positive | 3552587 - 3553441 | 30233.3 |
| hypothetical protein | HMPREF9695_03383 | Not Available | Negative | 3553635 - 3554612 | 35325.1 |
| hypothetical protein | HMPREF9695_03384 | Not Available | Positive | 3554817 - 3555137 | 12005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
