Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | HMPREF9695_03355 | Not Available | Negative | 3531075 - 3532514 | 52246.6 |
| utp-glucose-1-phosphate uridylyltransferase | HMPREF9695_03356 | Not Available | Positive | 3532752 - 3533789 | 37813.9 |
| hypothetical protein | HMPREF9695_03357 | Not Available | Negative | 3534249 - 3535562 | 49589.6 |
| peptide-methionine (s)-s-oxide reductase | HMPREF9695_03358 | Not Available | Positive | 3536631 - 3537347 | 26195.0 |
| peptide methionine sulfoxide reductase msrb | HMPREF9695_03359 | Not Available | Positive | 3537476 - 3537895 | 15094.6 |
| hypothetical protein | HMPREF9695_03360 | Not Available | Positive | 3538053 - 3538445 | 13971.0 |
| hypothetical protein | HMPREF9695_03361 | Not Available | Positive | 3538779 - 3539072 | 10870.7 |
| hypothetical protein | HMPREF9695_03362 | Not Available | Negative | 3539184 - 3539717 | 19067.2 |
| hypothetical protein | HMPREF9695_03363 | Not Available | Negative | 3539873 - 3540076 | 7094.25 |
| hypothetical protein | HMPREF9695_03364 | Not Available | Negative | 3540170 - 3540949 | 28850.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
