Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | HMPREF9695_02325 | Not Available | Negative | 2485800 - 2486216 | 15486.9 |
| dna-directed rna polymerase subunit alpha | HMPREF9695_02326 | Not Available | Negative | 2486414 - 2487445 | 37846.4 |
| 30s ribosomal protein s11 | HMPREF9695_02327 | Not Available | Negative | 2487564 - 2487953 | 13910.5 |
| 30s ribosomal protein s13 | HMPREF9695_02328 | Not Available | Negative | 2488060 - 2488428 | 13790.2 |
| adenylate kinase | HMPREF9695_02329 | Not Available | Negative | 2488590 - 2489462 | 30922.2 |
| preprotein translocase, secy subunit | HMPREF9695_02330 | Not Available | Negative | 2489459 - 2490790 | 48362.3 |
| 50s ribosomal protein l15 | HMPREF9695_02331 | Not Available | Negative | 2490925 - 2491443 | 18287.4 |
| 50s ribosomal protein l30 | HMPREF9695_02332 | Not Available | Negative | 2491455 - 2491652 | 7206.96 |
| 30s ribosomal protein s5 | HMPREF9695_02333 | Not Available | Negative | 2491735 - 2492313 | 20785.9 |
| 50s ribosomal protein l18 | HMPREF9695_02334 | Not Available | Negative | 2492386 - 2492748 | 13113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
