Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase class-3 | HMPREF9695_02266 | Not Available | Positive | 2430551 - 2431678 | 40036.6 |
| hypothetical protein | HMPREF9695_02267 | Not Available | Negative | 2431716 - 2432165 | 16768.4 |
| methanol/ethanol family pqq-dependent dehydrogenase | HMPREF9695_02268 | Not Available | Negative | 2432425 - 2434605 | 78224.2 |
| hypothetical protein | HMPREF9695_02269 | Not Available | Positive | 2434950 - 2435954 | 35894.3 |
| hypothetical protein | HMPREF9695_02270 | Not Available | Positive | 2435988 - 2437712 | 62552.4 |
| Trna-arg | Not Available | Not Available | Positive | 2437809 - 2437885 | Not Available |
| hypothetical protein | HMPREF9695_02271 | Not Available | Positive | 2438117 - 2439517 | 52920.4 |
| hypothetical protein | HMPREF9695_02272 | Not Available | Negative | 2439553 - 2440443 | 32897.2 |
| hypothetical protein | HMPREF9695_02273 | Not Available | Negative | 2440518 - 2441303 | 28075.2 |
| hypothetical protein | HMPREF9695_02274 | Not Available | Negative | 2441336 - 2442076 | 26781.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
