Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02168 | Not Available | Positive | 2334728 - 2335369 | 24057.5 |
| uracil-dna glycosylase, family 4 | HMPREF9695_02169 | Not Available | Positive | 2335350 - 2336057 | 25644.4 |
| hypothetical protein | HMPREF9695_02170 | Not Available | Negative | 2336054 - 2336629 | 20994.4 |
| ssra-binding protein | HMPREF9695_02171 | Not Available | Negative | 2336688 - 2337161 | 18113.1 |
| large-conductance mechanosensitive channel | HMPREF9695_02172 | Not Available | Negative | 2337283 - 2337696 | 14628.2 |
| dihydrodipicolinate synthase | HMPREF9695_02173 | Not Available | Negative | 2337721 - 2338611 | 31458.1 |
| hypothetical protein | HMPREF9695_02174 | Not Available | Positive | 2338854 - 2341052 | 79918.1 |
| hypothetical protein | HMPREF9695_02175 | Not Available | Positive | 2341193 - 2342077 | 31524.2 |
| hypothetical protein | HMPREF9695_02176 | Not Available | Negative | 2342371 - 2343921 | 54368.0 |
| hypothetical protein | HMPREF9695_02177 | Not Available | Negative | 2344437 - 2344601 | 6030.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
