Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-insensitive pyrophosphate-energized proton pump | HMPREF9695_02138 | Not Available | Negative | 2303500 - 2305620 | 72004.2 |
| thiamine-monophosphate kinase | HMPREF9695_02139 | Not Available | Negative | 2305854 - 2306849 | 33894.5 |
| transcription antitermination factor nusb | HMPREF9695_02140 | Not Available | Negative | 2306852 - 2307358 | 18400.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | HMPREF9695_02141 | Not Available | Negative | 2307355 - 2307849 | 17580.3 |
| hypothetical protein | HMPREF9695_02142 | Not Available | Negative | 2307960 - 2309822 | 65647.0 |
| hypothetical protein | HMPREF9695_02143 | Not Available | Negative | 2309911 - 2310579 | 24817.1 |
| riboflavin synthase, alpha subunit | HMPREF9695_02144 | Not Available | Negative | 2310635 - 2311243 | 21723.2 |
| riboflavin biosynthesis protein ribd | HMPREF9695_02145 | Not Available | Negative | 2311303 - 2312385 | 37789.9 |
| transcriptional repressor nrdr | HMPREF9695_02146 | Not Available | Negative | 2312616 - 2313101 | 18658.4 |
| serine hydroxymethyltransferase | HMPREF9695_02147 | Not Available | Negative | 2313114 - 2314415 | 46141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
