Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | HMPREF9695_02060 | Not Available | Negative | 2215684 - 2216958 | 46690.2 |
| hypothetical protein | HMPREF9695_02061 | Not Available | Negative | 2217301 - 2218068 | 28124.2 |
| hypothetical protein | HMPREF9695_02062 | Not Available | Negative | 2218105 - 2218320 | 7947.66 |
| hypothetical protein | HMPREF9695_02063 | Not Available | Negative | 2218326 - 2218778 | 15728.1 |
| hypothetical protein | HMPREF9695_02064 | Not Available | Negative | 2218856 - 2221996 | 112930.0 |
| hypothetical protein | HMPREF9695_02065 | Not Available | Positive | 2222244 - 2222753 | 18026.0 |
| hypothetical protein | HMPREF9695_02066 | Not Available | Negative | 2222779 - 2226144 | 120644.0 |
| atp-dependent clp protease proteolytic subunit | HMPREF9695_02067 | Not Available | Negative | 2226413 - 2227045 | 23402.6 |
| hypothetical protein | HMPREF9695_02068 | Not Available | Positive | 2227356 - 2227802 | 16360.8 |
| trigger factor | HMPREF9695_02069 | Not Available | Negative | 2227838 - 2229196 | 50290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
