Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | HMPREF9695_01992 | Not Available | Negative | 2138362 - 2139993 | 60354.2 |
| preprotein translocase, secg subunit | HMPREF9695_01993 | Not Available | Negative | 2140174 - 2140539 | 12119.9 |
| triosephosphate isomerase | HMPREF9695_01994 | Not Available | Negative | 2140674 - 2141429 | 25834.8 |
| hypothetical protein | HMPREF9695_01995 | Not Available | Positive | 2141703 - 2143598 | 68844.8 |
| anthranilate phosphoribosyltransferase | HMPREF9695_01996 | Not Available | Positive | 2143633 - 2144646 | 34357.4 |
| indole-3-glycerol phosphate synthase | HMPREF9695_01997 | Not Available | Positive | 2144660 - 2145481 | 29296.2 |
| molybdenum cofactor biosynthesis protein c | HMPREF9695_01998 | Not Available | Positive | 2145485 - 2145994 | 17895.2 |
| molybdenum cofactor synthesis domain-containing protein | HMPREF9695_01999 | Not Available | Positive | 2146005 - 2147213 | 41939.8 |
| lexa repressor | HMPREF9695_02000 | Not Available | Positive | 2147426 - 2148133 | 25734.2 |
| hypothetical protein | HMPREF9695_02001 | Not Available | Negative | 2148240 - 2150549 | 81018.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
