Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginyl-trna synthetase | HMPREF9695_01962 | Not Available | Negative | 2105002 - 2106795 | 65362.2 |
| deoxyguanosinetriphosphate triphosphohydrolase-like protein | HMPREF9695_01963 | Not Available | Negative | 2106961 - 2108169 | 45281.4 |
| iron-sulfur cluster assembly accessory protein | HMPREF9695_01964 | Not Available | Positive | 2108265 - 2108615 | 11951.1 |
| hypothetical protein | HMPREF9695_01965 | Not Available | Negative | 2108834 - 2109694 | 32303.6 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9695_01966 | Not Available | Negative | 2109703 - 2112831 | 112797.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_01967 | Not Available | Negative | 2112835 - 2113971 | 39952.9 |
| exodeoxyribonuclease iii | HMPREF9695_01968 | Not Available | Positive | 2114154 - 2114939 | 29760.4 |
| hypothetical protein | HMPREF9695_01969 | Not Available | Negative | 2114962 - 2115789 | 29669.2 |
| dihydroxy-acid dehydratase 2 | HMPREF9695_01970 | Not Available | Negative | 2115776 - 2117500 | 60630.1 |
| hypothetical protein | HMPREF9695_01971 | Not Available | Negative | 2117885 - 2118823 | 34993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
