Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01942 | Not Available | Negative | 2086781 - 2087188 | 14906.9 |
| protein-export membrane protein secf | HMPREF9695_01943 | Not Available | Negative | 2087307 - 2088308 | 36496.2 |
| protein-export membrane protein secd | HMPREF9695_01944 | Not Available | Negative | 2088323 - 2089921 | 57026.8 |
| preprotein translocase, yajc subunit | HMPREF9695_01945 | Not Available | Negative | 2089966 - 2090319 | 12821.8 |
| hypothetical protein | HMPREF9695_01946 | Not Available | Positive | 2090516 - 2091484 | 35380.6 |
| hypothetical protein | HMPREF9695_01947 | Not Available | Negative | 2091560 - 2092933 | 46959.6 |
| protein-l-isoaspartate o-methyltransferase | HMPREF9695_01948 | Not Available | Negative | 2093039 - 2093692 | 23969.2 |
| hypothetical protein | HMPREF9695_01949 | Not Available | Positive | 2093834 - 2094304 | 16524.8 |
| hypothetical protein | HMPREF9695_01950 | Not Available | Positive | 2094495 - 2094818 | 11600.2 |
| 5'-nucleotidase sure | HMPREF9695_01951 | Not Available | Negative | 2095004 - 2095771 | 27929.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
