Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01883 | Not Available | Negative | 2026514 - 2027488 | 34976.1 |
| hypothetical protein | HMPREF9695_01884 | Not Available | Negative | 2027578 - 2028315 | 26758.8 |
| hypothetical protein | HMPREF9695_01885 | Not Available | Negative | 2028312 - 2029046 | 26457.8 |
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | HMPREF9695_01886 | Not Available | Positive | 2029203 - 2030399 | 42594.0 |
| hypothetical protein | HMPREF9695_01887 | Not Available | Negative | 2030419 - 2030640 | 7758.33 |
| hypothetical protein | HMPREF9695_01888 | Not Available | Negative | 2030756 - 2031433 | 24889.7 |
| hypothetical protein | HMPREF9695_01889 | Not Available | Negative | 2031562 - 2031867 | 9207.71 |
| upf0391 membrane protein | HMPREF9695_01890 | Not Available | Positive | 2031986 - 2032159 | 6245.06 |
| hypothetical protein | HMPREF9695_01891 | Not Available | Negative | 2032163 - 2033113 | 34174.1 |
| hemimethylated dna binding domain-containing protein | HMPREF9695_01892 | Not Available | Positive | 2033238 - 2033570 | 12967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
