Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system atpase | HMPREF9695_01863 | Not Available | Negative | 1998647 - 2000410 | 62704.0 |
| vcbs repeat protein | HMPREF9695_01864 | Not Available | Negative | 2000553 - 2002487 | 65792.1 |
| vcbs repeat protein | HMPREF9695_01865 | Not Available | Negative | 2002488 - 2006359 | 133505.0 |
| hypothetical protein | HMPREF9695_01866 | Not Available | Positive | 2006922 - 2007779 | 30138.6 |
| hypothetical protein | HMPREF9695_01867 | Not Available | Negative | 2007845 - 2008042 | 6864.57 |
| hypothetical protein | HMPREF9695_01868 | Not Available | Negative | 2008698 - 2009402 | 24710.1 |
| tigr00370 family protein | HMPREF9695_01869 | Not Available | Positive | 2009493 - 2010302 | 28837.6 |
| hypothetical protein | HMPREF9695_01870 | Not Available | Positive | 2010299 - 2011312 | 34744.4 |
| upf0271 protein | HMPREF9695_01871 | Not Available | Positive | 2011332 - 2012099 | 26715.1 |
| hypothetical protein | HMPREF9695_01872 | Not Available | Negative | 2012083 - 2014788 | 96088.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
