Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | HMPREF9695_01845 | Not Available | Negative | 1980912 - 1981706 | 28677.1 |
| methionyl-trna synthetase | HMPREF9695_01846 | Not Available | Negative | 1981706 - 1983262 | 58072.8 |
| hypothetical protein | HMPREF9695_01847 | Not Available | Negative | 1983353 - 1984396 | 37446.6 |
| thymidylate kinase | HMPREF9695_01848 | Not Available | Negative | 1984393 - 1985085 | 25247.3 |
| hypothetical protein | HMPREF9695_01849 | Not Available | Negative | 1985087 - 1986337 | 44950.2 |
| hypothetical protein | HMPREF9695_01850 | Not Available | Positive | 1986451 - 1987389 | 34413.1 |
| rare lipoprotein a | HMPREF9695_01851 | Not Available | Negative | 1987408 - 1988352 | 33143.0 |
| Trna-ser | Not Available | Not Available | Positive | 1988778 - 1988867 | Not Available |
| hypothetical protein | HMPREF9695_01852 | Not Available | Negative | 1989258 - 1989671 | 15021.0 |
| hypothetical protein | HMPREF9695_01853 | Not Available | Negative | 1989846 - 1990145 | 10554.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
