Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid transaminase | HMPREF9695_01825 | Not Available | Positive | 1964025 - 1964882 | 31794.2 |
| protein hfq | HMPREF9695_01826 | Not Available | Positive | 1965053 - 1965301 | 9151.13 |
| gtp-binding protein hflx | HMPREF9695_01827 | Not Available | Positive | 1965314 - 1966690 | 50568.7 |
| mazg family protein | HMPREF9695_01828 | Not Available | Negative | 1966709 - 1967524 | 29880.4 |
| 7-cyano-7-deazaguanine synthase | HMPREF9695_01829 | Not Available | Positive | 1967620 - 1968348 | 26336.3 |
| hypothetical protein | HMPREF9695_01830 | Not Available | Positive | 1968345 - 1968902 | 19364.5 |
| hypothetical protein | HMPREF9695_01831 | Not Available | Negative | 1968904 - 1969737 | 29665.9 |
| hypothetical protein | HMPREF9695_01832 | Not Available | Positive | 1969873 - 1970124 | 9184.23 |
| hypothetical protein | HMPREF9695_01833 | Not Available | Negative | 1970140 - 1970643 | 18552.8 |
| hypothetical protein | HMPREF9695_01834 | Not Available | Positive | 1970898 - 1972475 | 59475.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
