Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | HMPREF9695_01815 | Not Available | Negative | 1952027 - 1952623 | 21578.4 |
| lipoyl synthase | HMPREF9695_01816 | Not Available | Positive | 1952763 - 1953722 | 35250.2 |
| hypothetical protein | HMPREF9695_01817 | Not Available | Positive | 1953781 - 1954332 | 21052.2 |
| competence/damage-inducible protein cina | HMPREF9695_01818 | Not Available | Negative | 1954208 - 1954837 | 22041.6 |
| bifunctional enzyme ispd/ispf | HMPREF9695_01819 | Not Available | Negative | 1954839 - 1956032 | 42095.0 |
| hypothetical protein | HMPREF9695_01820 | Not Available | Positive | 1956470 - 1957315 | 29975.8 |
| nitrogen regulation protein ntrb | HMPREF9695_01821 | Not Available | Positive | 1957312 - 1958499 | 43014.7 |
| nitrogen assimilation regulatory protein | HMPREF9695_01822 | Not Available | Positive | 1958506 - 1959948 | 52960.2 |
| pas domain s-box protein | HMPREF9695_01823 | Not Available | Positive | 1960202 - 1962472 | 83150.4 |
| nitrogen assimilation regulatory protein ntrx | HMPREF9695_01824 | Not Available | Positive | 1962490 - 1963860 | 50170.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
