Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01806 | Not Available | Negative | 1941151 - 1942146 | 38275.9 |
| hypothetical protein | HMPREF9695_01807 | Not Available | Negative | 1942247 - 1942801 | 20446.1 |
| Trna-cys | Not Available | Not Available | Positive | 1942883 - 1942956 | Not Available |
| hypothetical protein | HMPREF9695_01808 | Not Available | Negative | 1943112 - 1943375 | 9305.02 |
| hypothetical protein | HMPREF9695_01809 | Not Available | Negative | 1943372 - 1944037 | 24044.1 |
| protein-l-isoaspartate o-methyltransferase | HMPREF9695_01810 | Not Available | Positive | 1944211 - 1944876 | 23654.4 |
| tolc family type i secretion outer membrane protein | HMPREF9695_01811 | Not Available | Positive | 1945091 - 1946503 | 50571.0 |
| hypothetical protein | HMPREF9695_01812 | Not Available | Positive | 1946799 - 1947536 | 26169.1 |
| valyl-trna synthetase | HMPREF9695_01813 | Not Available | Positive | 1947772 - 1950630 | 107200.0 |
| hypothetical protein | HMPREF9695_01814 | Not Available | Positive | 1950627 - 1951796 | 41492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
