Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| his/glu/gln/arg/opine family amino abc transporter, permease, 3-tm region | HMPREF9695_01787 | Not Available | Positive | 1916447 - 1917652 | 42967.7 |
| his/glu/gln/arg/opine family amino abc transporter, permease, 3-tm region | HMPREF9695_01788 | Not Available | Positive | 1917649 - 1919166 | 55052.4 |
| general l-amino acid transport atp-binding protein aapp | HMPREF9695_01789 | Not Available | Positive | 1919176 - 1919916 | 27495.6 |
| hypothetical protein | HMPREF9695_01790 | Not Available | Negative | 1920096 - 1921136 | 37570.2 |
| hypothetical protein | HMPREF9695_01791 | Not Available | Negative | 1921285 - 1922514 | 46945.1 |
| hypothetical protein | HMPREF9695_01792 | Not Available | Negative | 1922507 - 1922839 | 12373.2 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | HMPREF9695_01793 | Not Available | Positive | 1922982 - 1924385 | 49762.8 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_01794 | Not Available | Positive | 1924375 - 1925550 | 41566.8 |
| hypothetical protein | HMPREF9695_01795 | Not Available | Positive | 1925547 - 1925738 | 6599.61 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9695_01796 | Not Available | Positive | 1925905 - 1929057 | 111487.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
