Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase, paaj subunit | HMPREF9695_01729 | Not Available | Positive | 1854960 - 1855463 | 18201.9 |
| phenylacetate-coa oxygenase/reductase, paak subunit | HMPREF9695_01730 | Not Available | Positive | 1855475 - 1856554 | 39379.5 |
| hypothetical protein | HMPREF9695_01731 | Not Available | Negative | 1856568 - 1856993 | 15084.3 |
| hypothetical protein | HMPREF9695_01732 | Not Available | Negative | 1857016 - 1858290 | 46740.6 |
| hypothetical protein | HMPREF9695_01733 | Not Available | Negative | 1858307 - 1858612 | 11011.3 |
| phenylacetic acid degradation protein paan | HMPREF9695_01734 | Not Available | Negative | 1858638 - 1860671 | 73460.9 |
| hypothetical protein | HMPREF9695_01735 | Not Available | Negative | 1860738 - 1861349 | 22736.2 |
| phenylacetate-coa ligase | HMPREF9695_01736 | Not Available | Negative | 1861358 - 1862689 | 49498.7 |
| phenylacetic acid degradation protein paad | HMPREF9695_01737 | Not Available | Negative | 1862704 - 1863177 | 16899.8 |
| hypothetical protein | HMPREF9695_01738 | Not Available | Negative | 1863177 - 1863968 | 27974.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
