Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kama family protein | HMPREF9695_01720 | Not Available | Positive | 1848027 - 1849094 | 39024.9 |
| hypothetical protein | HMPREF9695_01721 | Not Available | Positive | 1849095 - 1849292 | 7096.45 |
| hypothetical protein | HMPREF9695_01722 | Not Available | Positive | 1849335 - 1849586 | 8700.47 |
| hypothetical protein | HMPREF9695_01723 | Not Available | Negative | 1849606 - 1850178 | 20098.6 |
| hypothetical protein | HMPREF9695_01724 | Not Available | Negative | 1850267 - 1851040 | 28756.1 |
| Trna-glu | Not Available | Not Available | Positive | 1851251 - 1851325 | Not Available |
| phenylacetic acid degradation operon negative regulatory protein paax | HMPREF9695_01725 | Not Available | Positive | 1851816 - 1852709 | 32388.8 |
| phenylacetate-coa oxygenase, paag subunit | HMPREF9695_01726 | Not Available | Positive | 1852765 - 1853757 | 37467.1 |
| phenylacetate-coa oxygenase, paah subunit | HMPREF9695_01727 | Not Available | Positive | 1853774 - 1854061 | 10654.7 |
| phenylacetate-coa oxygenase, paai subunit | HMPREF9695_01728 | Not Available | Positive | 1854190 - 1854966 | 29079.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
