Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01710 | Not Available | Positive | 1836279 - 1837496 | 44527.8 |
| hypothetical protein | HMPREF9695_01711 | Not Available | Positive | 1837580 - 1838902 | 46227.1 |
| fructose-1,6-bisphosphatase, class ii | HMPREF9695_01712 | Not Available | Positive | 1838957 - 1839955 | 35447.1 |
| hypothetical protein | HMPREF9695_01713 | Not Available | Positive | 1839970 - 1840419 | 17312.6 |
| haloacid dehalogenase, type ii | HMPREF9695_01714 | Not Available | Positive | 1840428 - 1841138 | 26159.2 |
| single-stranded-dna-specific exonuclease recj | HMPREF9695_01715 | Not Available | Positive | 1841337 - 1843178 | 65120.6 |
| lytic murein transglycosylase | HMPREF9695_01716 | Not Available | Negative | 1843182 - 1844339 | 42673.7 |
| hypothetical protein | HMPREF9695_01717 | Not Available | Negative | 1844538 - 1846250 | 63240.9 |
| elongation factor p | HMPREF9695_01718 | Not Available | Negative | 1846273 - 1846839 | 20826.7 |
| lysine-trna ligase-like protein genx | HMPREF9695_01719 | Not Available | Positive | 1846978 - 1848030 | 38778.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
