Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline-quinone-dependent quinate dehydrogenase | AT5A_00920 | Not Available | Negative | 211130 - 213559 | 85635.3 |
| lysr family transcriptional regulator | AT5A_00925 | Not Available | Positive | 213887 - 214861 | 35731.9 |
| bifunctional malic enzyme oxidoreductase/phosphotransacetylase | AT5A_00930 | Not Available | Positive | 215022 - 217310 | 82542.8 |
| amino acid abc transporter substrate-binding protein | AT5A_00935 | Not Available | Positive | 217579 - 218418 | 29993.2 |
| amino acid abc transporter permease | AT5A_00940 | Not Available | Positive | 218621 - 219364 | 26947.5 |
| amino acid abc transporter permease | AT5A_00945 | Not Available | Positive | 219361 - 220143 | 28557.7 |
| phosphate abc transporter atp-binding protein | AT5A_00950 | Not Available | Positive | 220156 - 220956 | 28715.9 |
| hypothetical protein | AT5A_00955 | Not Available | Positive | 220961 - 222307 | 46504.3 |
| monooxygenase | AT5A_00960 | Not Available | Positive | 222326 - 223645 | 48672.9 |
| sensory methylation accepting chemotaxis protein | AT5A_00965 | Not Available | Negative | 223716 - 225452 | 63426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


