Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AT5A_00570 | Not Available | Positive | 133835 - 134620 | 27956.3 |
| thiamine biosynthesis associated protein | AT5A_00575 | Not Available | Positive | 134617 - 135561 | 34742.0 |
| hydoxyethylthiazole kinase | AT5A_00580 | Not Available | Positive | 135558 - 136304 | 26168.7 |
| thiamine-phosphate pyrophosphorylase | AT5A_00585 | Not Available | Positive | 136291 - 136953 | 22797.5 |
| phosphomethylpyrimidine kinase | AT5A_00590 | Not Available | Positive | 136950 - 137747 | 27252.9 |
| asnc family transcriptional regulator | AT5A_00595 | Not Available | Negative | 137975 - 138433 | 16965.5 |
| alanine racemase | AT5A_00600 | Not Available | Positive | 138561 - 139727 | 40870.2 |
| d-amino acid dehydrogenase small subunit | AT5A_00605 | Not Available | Positive | 139735 - 140991 | 45227.6 |
| gntr family transcriptional regulator | AT5A_00610 | Not Available | Negative | 141041 - 141802 | 27936.5 |
| hypothetical protein | AT5A_00615 | Not Available | Positive | 141928 - 142440 | 19209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


