Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, permease subunit nikc | AT5A_05800 | Not Available | Positive | 1230377 - 1231237 | 31324.2 |
| nickel import atp-binding protein nikd | AT5A_05805 | Not Available | Positive | 1231379 - 1232443 | 37661.4 |
| nickel import atp-binding protein nike | AT5A_05810 | Not Available | Positive | 1232456 - 1233466 | 37461.5 |
| nickel abc transporter, periplasmic nickel-binding protein | AT5A_05815 | Not Available | Positive | 1233706 - 1235199 | 53791.7 |
| hypothetical protein | AT5A_05820 | Not Available | Negative | 1235591 - 1235845 | 8502.01 |
| potassium uptake protein | AT5A_05825 | Not Available | Negative | 1235953 - 1237410 | 52385.7 |
| threonine dehydratase | AT5A_05830 | Not Available | Positive | 1237451 - 1238764 | 47924.0 |
| hypothetical protein | AT5A_05835 | Not Available | Positive | 1238840 - 1239148 | 11167.2 |
| sensory box/ggdef family protein | AT5A_05840 | Not Available | Positive | 1239260 - 1240531 | 47318.5 |
| acyl-carrier-protein phosphodiesterase | AT5A_05845 | Not Available | Negative | 1240574 - 1241191 | 21485.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


