Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter nucleotide-binding protein/atpase | AT5A_23455 | Not Available | Negative | 4880898 - 4881923 | 36253.1 |
| spermidine/putrescine abc transporter permease | AT5A_23460 | Not Available | Negative | 4881916 - 4882695 | 27902.1 |
| spermidine/putrescine abc transporter permease | AT5A_23465 | Not Available | Negative | 4882692 - 4883519 | 29419.0 |
| spermidine/putrescine abc transporter substrate binding protein | AT5A_23470 | Not Available | Negative | 4883689 - 4884711 | 37130.6 |
| laci family transcriptional regulator | AT5A_23475 | Not Available | Negative | 4884708 - 4885775 | 37140.5 |
| lysr family transcriptional regulator | AT5A_23480 | Not Available | Negative | 4885904 - 4886830 | 33597.6 |
| glutaryl-coa dehydrogenase | AT5A_23485 | Not Available | Positive | 4886927 - 4888114 | 43378.3 |
| tonb-dependent siderophore receptor | AT5A_23490 | Not Available | Negative | 4888203 - 4890278 | 76093.5 |
| iclr family transcriptional regulator | AT5A_23495 | Not Available | Positive | 4890578 - 4891354 | 27137.2 |
| monooxygenase, ntaa/snaa/soxa family protein | AT5A_23500 | Not Available | Negative | 4891357 - 4892658 | 47235.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


