Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative periplasmic c4-dicarboxylate transport protein | AT5A_21961 | Not Available | Negative | 4561876 - 4562853 | 35937.3 |
| putative dicarboxylic acid hydrolase | AT5A_21966 | Not Available | Negative | 4563000 - 4563797 | 29138.7 |
| mandelate racemase/muconate lactonizing-like protein | AT5A_21971 | Not Available | Negative | 4563875 - 4565011 | 41451.8 |
| 5-dehydro-4-deoxyglucarate dehydratase | AT5A_21976 | Not Available | Negative | 4565036 - 4565947 | 32446.1 |
| 2-deoxy-d-gluconate 3-dehydrogenase | AT5A_21981 | Not Available | Negative | 4566061 - 4566804 | 25726.7 |
| 5-keto-4-deoxyuronate isomerase | AT5A_21986 | Not Available | Negative | 4566801 - 4567625 | 30353.0 |
| hypothetical protein | AT5A_21991 | Not Available | Positive | 4567801 - 4568598 | 29104.6 |
| gntr family transcriptional regulator | AT5A_21996 | Not Available | Positive | 4568733 - 4569470 | 26685.9 |
| cupin 2 domain-containing protein | AT5A_22001 | Not Available | Positive | 4569512 - 4569829 | 11784.9 |
| proline dipeptidase | AT5A_22006 | Not Available | Negative | 4569842 - 4571074 | 43302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


