Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pca operon regulatory protein, iclr family | AT5A_16141 | Not Available | Negative | 3281282 - 3282043 | 27516.8 |
| 3-oxoadipate coa-transferase subunit a/beta-ketoadipate:succinyl-coa transferase subunit a | AT5A_16146 | Not Available | Positive | 3282180 - 3282887 | 24718.7 |
| 3-oxoadipate coa-transferase subunit b | AT5A_16151 | Not Available | Positive | 3282884 - 3283579 | 24827.7 |
| beta-ketoadipyl coa thiolase | AT5A_16156 | Not Available | Positive | 3283590 - 3284795 | 41697.0 |
| transcription regulator, laci family protein | AT5A_16161 | Not Available | Positive | 3285199 - 3286227 | 38149.2 |
| putative rhizopine uptake abc transporter periplasmic solute-binding protein | AT5A_16166 | Not Available | Positive | 3286510 - 3287451 | 33071.5 |
| myo-inositol catabolism protein | AT5A_16171 | Not Available | Positive | 3287595 - 3288494 | 34506.0 |
| inositol 2-dehydrogenase | AT5A_16176 | Not Available | Positive | 3288505 - 3289515 | 36000.1 |
| inosose isomerase | AT5A_16181 | Not Available | Positive | 3289525 - 3290310 | 27987.4 |
| laci family transcriptional regulator | AT5A_16186 | Not Available | Positive | 3290531 - 3291577 | 37733.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


