Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | AT5A_16091 | Not Available | Negative | 3272702 - 3273352 | 23078.8 |
| amino acid abc transporter permease | AT5A_16096 | Not Available | Negative | 3273363 - 3274031 | 24083.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | AT5A_16101 | Not Available | Negative | 3274400 - 3275461 | 37349.7 |
| protocatechuate 3,4-dioxygenase, alpha subunit | AT5A_16106 | Not Available | Negative | 3275480 - 3276100 | 22864.0 |
| protocatechuate 3,4-dioxygenase, beta subunit | AT5A_16111 | Not Available | Negative | 3276103 - 3276843 | 28021.5 |
| gamma carboxymuconolactone decarboxylase | AT5A_16116 | Not Available | Negative | 3276840 - 3277262 | 15336.0 |
| 3-oxoadipate enol-lactonase | AT5A_16121 | Not Available | Negative | 3277266 - 3278063 | 28698.2 |
| lysr family transcriptional regulator | AT5A_16126 | Not Available | Positive | 3278159 - 3279100 | 33803.2 |
| 4-hydroxybenzoate 3-monooxygenase | AT5A_16131 | Not Available | Negative | 3279097 - 3280269 | 43785.9 |
| arac family transcriptional regulator | AT5A_16136 | Not Available | Positive | 3280389 - 3281312 | 34173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


