Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exu regulon transcriptional regulator | AT5A_00370 | Not Available | Positive | 83373 - 84089 | 26607.7 |
| trap dicarboxylate transporter subunit dctp | AT5A_00375 | Not Available | Positive | 84151 - 85125 | 36086.1 |
| tripartite atp-independent periplasmic transporter subunit dctq | AT5A_00380 | Not Available | Positive | 85187 - 85759 | 22165.1 |
| trap c4-dicarboxylate transport system permease dctm | AT5A_00385 | Not Available | Positive | 85764 - 87170 | 49958.0 |
| zinc-binding dehydrogenase | AT5A_00390 | Not Available | Positive | 87243 - 88289 | 36602.1 |
| mannonate dehydratase | AT5A_00395 | Not Available | Positive | 88306 - 89514 | 44722.9 |
| hypothetical protein | AT5A_00400 | Not Available | Negative | 89543 - 89965 | 15356.1 |
| aldehyde dehydrogenase | AT5A_00405 | Not Available | Positive | 90142 - 91653 | 53226.2 |
| c4-dicarboxylate-binding periplasmic protein | AT5A_00410 | Not Available | Negative | 91711 - 92709 | 36157.2 |
| trap c4-dicarboxylate transport system permease dctm | AT5A_00415 | Not Available | Negative | 92726 - 94558 | 62498.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


