Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 5A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1190263 bp
Thymine Count
1188533 bp
Guanine Count
1673681 bp
Cytosine Count
1690631 bp
Genome Length
5743108 bp
Protein-coding Genes
5415 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | AT5A_00120 | Not Available | Negative | 22512 - 23645 | 41136.2 |
| lysr family transcriptional regulator | AT5A_00125 | Not Available | Positive | 24183 - 25076 | 33256.6 |
| ribose abc transporter substrate binding protein | AT5A_00130 | Not Available | Negative | 25284 - 26237 | 34461.5 |
| ribose abc transporter membrane spanning protein | AT5A_00135 | Not Available | Negative | 26328 - 27329 | 34873.8 |
| ribose abc transporter nucleotide binding protein/atpase | AT5A_00140 | Not Available | Negative | 27381 - 28904 | 54830.1 |
| diguanylate cyclase | AT5A_00145 | Not Available | Negative | 29168 - 30673 | 57315.5 |
| hypothetical protein | AT5A_00150 | Not Available | Negative | 30848 - 31672 | 30823.9 |
| putative methyltransferase protein | AT5A_00155 | Not Available | Negative | 31816 - 32862 | 38934.3 |
| diguanylate cyclase | AT5A_00160 | Not Available | Positive | 33179 - 35173 | 74389.9 |
| malate dehydrogenase | AT5A_00165 | Not Available | Negative | 35218 - 36294 | 38139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


