Parabacteroides sp. HGS0025

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. HGS0025 is a rod-shaped bacterium characterized by the presence of flagella. This motility feature may enhance its ability to navigate various environments, potentially influencing its ecological interactions and colonization strategies. The organism possesses a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number AGES00000000.1, which serves as a reference for genome data and further studies. Understanding the genomic characteristics associated with Parabacteroides sp. HGS0025 can provide insights into its metabolic capabilities and ecological roles within its habitat. In the broader context of microbiology, members of the Parabacteroides genus are often associated with the human gut microbiome, where they can play significant roles in digestion and nutrient absorption. Their motility, combined with a single replicon, may confer advantages in competing for resources or establishing symbiotic relationships within complex microbial communities. Overall, the traits of Parabacteroides sp. HGS0025 highlight its potential importance in microbial ecology, particularly in environments where motility and genetic efficiency are advantageous for survival and interaction with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. HGS0025
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. HGS0025 aczIs-supercont1.10.C18, whole genome

Gene Summary

Adenine Count

1883466 bp

Thymine Count

1870670 bp

Guanine Count

1507234 bp

Cytosine Count

1479967 bp

Genome Length

6741337 bp

Protein-coding Genes

5293 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susc/raga family tonb-linked outer membrane proteinHMPREF1212_03425Not AvailablePositive4279126 - 4282350119456.0
hypothetical proteinHMPREF1212_03426Not AvailablePositive4282376 - 428383955502.9
hypothetical proteinHMPREF1212_03427Not AvailablePositive4284109 - 428501732442.9
hypothetical proteinHMPREF1212_03428Not AvailablePositive4285022 - 428604136804.4
hypothetical proteinHMPREF1212_03429Not AvailablePositive4286046 - 428775263795.2
mate efflux family proteinHMPREF1212_03430Not AvailableNegative4287811 - 428909147560.6
crispr-associated protein cas5, subtype i-c/dvulgHMPREF1212_03431Not AvailablePositive4289911 - 429059126264.6
crispr-associated protein cas8c/csd1, subtype i-c/dvulgHMPREF1212_03432Not AvailablePositive4290588 - 429234265866.2
crispr-associated protein cas7/csd2, subtype i-c/dvulgHMPREF1212_03433Not AvailablePositive4292355 - 429322132322.4
crispr-associated protein cas4HMPREF1212_03434Not AvailablePositive4293218 - 429388625717.2

Displaying genes 3431 – 3440 of 5374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.