Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 strain JA2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax benzoatilyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 strain JA2

Accession NumberAEWG00000000.1

Gene Summary

Adenine Count

586341 bp

Thymine Count

587731 bp

Guanine Count

1479061 bp

Cytosine Count

1476761 bp

Genome Length

4129939 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
extracellular ligand-binding receptorRBXJA2T_03668Not Available-774155 - 77529739695.0
sulfur oxidation protein soxzRBXJA2T_03673Not Available-775667 - 77598111303.7
hypothetical proteinRBXJA2T_03678Not Available-775992 - 77646816450.9
hypothetical proteinRBXJA2T_03683Not Available+776622 - 7767865953.4
2-dehydropantoate 2-reductaseRBXJA2T_03688Not Available-776848 - 77782833476.8
helix-turn-helix type 11 domain-containing proteinRBXJA2T_03693Not Available-777825 - 77883838220.5
formate--tetrahydrofolate ligaseRBXJA2T_03698Not Available-778852 - 78053159925.4
yeca family proteinRBXJA2T_03703Not Available+780709 - 78132622404.2
multi-sensor hybrid histidine kinaseRBXJA2T_03708Not Available-781331 - 78401295695.8
hypothetical proteinRBXJA2T_03713Not Available+784096 - 78439810907.1

Displaying genes 741 – 750 of 3947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

132 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 132 metabolites