Succinatimonas hippei YIT 12066

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Succinivibrionaceae

Genus

Succinatimonas

Description

Succinatimonas hippei YIT 12066 is a Gram-negative, non-motile, anaerobic bacterium characterized by its rod shape. It thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range. This bacterium contains a single replicon and does not form spores, indicating its reliance on specific environmental conditions for survival and reproduction. The anaerobic nature of Succinatimonas hippei suggests that it plays a role in environments devoid of oxygen, likely contributing to anaerobic metabolic processes. Its optimum growth temperature of 37°C aligns with the conditions found in various natural and human-associated environments, which may include the gastrointestinal tract of mammals. As a non-spore-forming organism, Succinatimonas hippei may have limited resilience to extreme environmental conditions compared to spore-forming bacteria. This trait emphasizes the importance of its ecological niche, where it may rely on stable conditions to maintain its viability. The accession number AEVO00000000.1 provides a reference for genetic and genomic studies, which could further elucidate the metabolic pathways and ecological roles of this bacterium. Understanding the biological characteristics of Succinatimonas hippei can offer insights into its potential contributions to microbial ecosystems, particularly in anaerobic environments, and its interactions with other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilySuccinivibrionaceae
GenusSuccinatimonas
SpeciesSuccinatimonas hippei
StrainYIT 12066

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Succinatimonas hippei YIT 12066 S_hippeiYIT12066-1.0_Cont1127.2,

Gene Summary

Adenine Count

685450 bp

Thymine Count

691751 bp

Guanine Count

469643 bp

Cytosine Count

459098 bp

Genome Length

2305942 bp

Protein-coding Genes

2169 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate racemaseHMPREF9444_00026Not AvailablePositive21039 - 2172825378.1
hypothetical proteinHMPREF9444_00027Not AvailablePositive21908 - 221117739.43
hypothetical proteinHMPREF9444_00028Not AvailablePositive22542 - 228059925.03
oxidoreductase, aldo/keto reductase family proteinHMPREF9444_00029Not AvailableNegative22999 - 2387433485.4
hypothetical proteinHMPREF9444_00030Not AvailableNegative23891 - 2473632235.3
6-o-methylguanine dna methyltransferase, dna binding domain proteinHMPREF9444_00031Not AvailableNegative24867 - 2517511670.2
23s rrna (uracil-5-)-methyltransferase rumaHMPREF9444_00032Not AvailableNegative25508 - 2684249497.1
hypothetical proteinHMPREF9444_00033Not AvailablePositive26917 - 2743518171.9
Trna-metNot AvailableNot AvailablePositive27554 - 27630Not Available
dna primaseHMPREF9444_00035Not AvailableNegative27737 - 2956069225.7

Displaying genes 31 – 40 of 2224 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

360 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm00013353-oxo-3-phenylpropanoateC9H7O3Chemical structure of 3-oxo-3-phenylpropanoateNot available
Average163.153Da
Monoisotopic163.0400677Da

Displaying 1–10 of 360 metabolites

Health Effects

No health effects information available for this bacterium.