Acetobacter pomorum DM001

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Acetobacter

Description

Acetobacter pomorum DM001 is a bacterium characterized by the presence of flagella, which contributes to its motility. This trait is significant as it allows the organism to navigate its environment, aiding in its survival and potential interactions with its surroundings. The organism possesses a single replicon, which indicates its genetic structure is organized in a streamlined manner. This can have implications for its replication and stability, potentially facilitating efficient cellular processes. The genetic sequence of Acetobacter pomorum DM001 is cataloged under the accession number AEUP00000000.1. This accession provides a reference for researchers interested in studying the genetic makeup and functionality of this specific strain. From a biological perspective, Acetobacter pomorum DM001 is part of a broader ecological community where its motility may allow it to exploit various niches, particularly in environments rich in organic materials. Its ability to move towards resources could enhance its role in biogeochemical cycles, particularly in the fermentation processes where it may contribute to the production of acetic acid. Thus, understanding the traits of Acetobacter pomorum DM001 may provide insights into its ecological roles and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusAcetobacter
SpeciesAcetobacter pomorum
StrainDM001

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acetobacter pomorum DM001 Contig00240, whole genome shotgun

Gene Summary

Adenine Count

683586 bp

Thymine Count

691055 bp

Guanine Count

757614 bp

Cytosine Count

751161 bp

Genome Length

2883421 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate-semialdehyde dehydrogenaseAPO_2535Not AvailablePositive2582148 - 258360252146.1
alcohol dehydrogenase cytochrome c subunitAPO_2536Not AvailableNegative2583706 - 258503147783.8
glucose-methanol-choline oxidoreductaseAPO_2537Not AvailableNegative2585018 - 258665560897.6
sorbitol dehydrogenase small subunitAPO_2538Not AvailableNegative2586677 - 258734824485.3
hypothetical proteinAPO_2539Not AvailableNegative2587462 - 258792617289.4
porin bAPO_2540Not AvailableNegative2588284 - 258993061460.5
c4-dicarboxylate transport proteinAPO_2541Not AvailableNegative2590241 - 259154545293.7
vanillate o-demethylase oxygenase subunitAPO_2542Not AvailableNegative2591954 - 259300939557.1
hth-type transcriptional activator cmprAPO_2543Not AvailablePositive2593130 - 259404433541.7
nb family proteinAPO_2544Not AvailableNegative2594106 - 259493329834.7

Displaying genes 2241 – 2250 of 2455 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.